$ MPP [ 28.12.2006 ]
These are the help pages for the Microarray-to-Phylogeny Pipeline system, developed and
written by me, Rob Davey, as part of my BioInformatics PhD at
the John Innes Centre in Norwich, UK. This
project was funded by the BBSRC, and was carried out in collaboration with the
Institute of Food Research and the
University of East Anglia, Norwich, UK.
MPP aims to provide a pathway from raw Comparative Genomic Hybridisation (CGH) microarray
data to phylogeny, by means of predicting gene content information for that data.
Written entirely in the Java programming language,
the full Javadoc API for MPP can be found here.
View MPP help pages:
One HTML page for each chapter
Please read the installation instructions carefully to ensure things are set up correctly!
Please be aware that these pages are still under construction, and as such will be updated
frequently, and will be completed soon. If you have any questions in the meantime, please
$ Current version as of [ 28.12.2006 ]
The current MPP version for release is 2.0.